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Biocomplexity Institute

Proceedings of the Institute

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Network Systems Science and Advanced Computing
Conference Proceeding

Theoretical Models and Preliminary Results for Contact Tracing and Isolation

Li G; Haddadan A; Li A; Marathe M; Srinivasan A; Vullikanti A; Zhao Z . Proc. of the 21st Int’l Conference on Autonomous Agents and Multiagent Systems. ACM. 2022; :1672-1674
Network Systems Science and Advanced Computing
Article

Understanding the co-evolution of mask-wearing and epidemics: a network perspective

Qiu Z; Espinoza B; Vasconcelos V; Constantino S; Crabtree S; Yang L; Vullikanti A; Chen J; Weibull J; Basu K; Dixit A; Levin S; Marathe M . Environmental Sciences. PNAS. 2022; 119(26)
Network Systems Science and Advanced Computing
Article

Using Active Queries to Infer Symmetric Node Functions of Graph Dynamical Systems

Adiga A; Kuhlman C; Marathe M; Ravi S; Rosenkrantz D; Stearns R . Journal of Machine Learning Research. 2022; 23(251):1-43
Network Systems Science and Advanced Computing
Preprint/Prospective Article

Utility of human judgment ensembles during times of pandemic uncertainty: A case study during the COVID-19 Omicron BA.1 wave in the USA

Venkatramanan S; Cambeiro J; Liptay T; Lewis B; Orr M; Dempsey G; Telionis A; Crow J; Barrett C; Marathe M . medRxiv. 2022;
Network Systems Science and Advanced Computing
Conference Proceeding

All models are useful: Bayesian ensembling for robust high resolution covid-19 forecasting

Adiga Ani; Wang L; Hurt B; Peddireddy A; Porebski P; Venkatramanan S; Lewis B; Marathe M . Proceedings of the 27th ACM SIGKDD Conference on Knowledge Discovery & Data Mining. ACM. 2021; :2505-2513
Network Systems Science and Advanced Computing
Article

Asymptomatic individuals can increase the final epidemic size under adaptive human behavior

Espinoza B; Marathe M; Swarup S; Thakur M . Scientific Reports. Nature. 2021; 11
Network Systems Science and Advanced Computing
Conference Proceeding

High performance agent-based modeling to study realistic contact tracing protocols

Hoops S; Chen J; Adiga A; Lewis B; Mortveit H; Baek H; Wilson M; Xie D; Swarup S; Venkatramanan S . 2021 Winter Simulation Conference (WSC). IEEE. 2021; :1-12
Network Systems Science and Advanced Computing
Conference Proceeding

Informing University Covid-19 Decisions Using Simple Compartmental Models

Hurt B; Adiga Ani; Marathe M; Barrett C . 2021 Winter Simulation Conference (WSC). IEEE. 2021;
Network Systems Science and Advanced Computing
Report

Modeling of future COVID-19 cases, hospitalizations, and deaths, by vaccination rates and nonpharmaceutical intervention scenarios—United States, April–September 2021

Borchering R; Viboud C; Howerton E; Smith C; Truelove S; Runge M; Reich N; Contamin L; Levander J; Salerno J; van Panhuis W; Kinsey M; Tallaksen K; Obrecht F; Asher L; Costello C; Kelbaugh M; Wilson S; Shin L; Gallagher M; Mullany L; Rainwater-Lovett K; Lemaitre J; Dent J; Grantz K; Kaminsky J; Lauer S; Lee E; Meredith H; Perez-Saez J; Keegan L; Karlen D; Chinazzi M; Davis J; Mu K; Xiong X; Pastore Y Piontti A; Vespignani A; Srivastava A; Porebski P; Venkatramanan S; Adiga Ani; Lewis B; Klahn B; Outten J; Schlitt J; Corbett P; Telionis A; Wang L; Peddireddy A; Hurt B; Chen J; Vullikanti A; Marathe M; Healy J; Slayton R; Biggerstaff M; Johansson M; Shea K; Lessler J . Morbidity and Mortality Weekly Report. Centers for Disease Control and Prevention. 2021; 70(19):719-724
Network Systems Science and Advanced Computing
Conference Proceeding

Scalable epidemiological workflows to support covid-19 planning and response

Machi D; Bhattacharya P; Hoops S; Chen J; Mortveit H; Venkatramanan S; Lewis B; Wilson M; Fadikar A; Maiden T; Barrett C; Marathe M . 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE. 2021;