Mathematical Biocomplexity
Mathematical Biocomplexity

Publications

Divisions

Our Scholarly Work

Search our numerous publications, which reflect our research expertise and scholarly work. Publications are searchable by topic area or keyword, such as an author’s last name, publication, year, etc.

All Publications

Mathematical Biocomplexity
Software/Dashboard

Dual tree

He Q 2023;
Mathematical Biocomplexity
Software/Dashboard

Plasmid k-mer pipeline

He Q 2023;
Mathematical Biocomplexity
Software/Dashboard

Plasmid AMR-MGE complex detector

Li T 2023;
Mathematical Biocomplexity
Preprint/Prospective Article

BUYING TIME: DETECTING VOCS IN SARS-COV-2 VIA CO-EVOLUTIONARY SIGNALS

Barrett C; Bura A; He Q; Huang F; Li T; Reidys C 2022;
Mathematical Biocomplexity
Preprint/Prospective Article

A computational framework for weighted simplicial homology

Bura A; Dutta N; Li T; Reidys C . arXiv preprint arXiv:2206.04612. arxiv.org. 2022;
Executive Leadership | Mathematical Biocomplexity | Network Systems Science and Advanced Computing | Research and Business Operations | Social and Decision Analytics
Report

Explorations in Connection: 2021-2022 Annual Report

Barrett C; Coble L; Shipp S; Marathe M; Reidys C; Passarello K; Doyle L; Mathematical Biocomplexity Division; Network Systems Science and Advanced Computing Division; Social and Decision Analytics Division . Biocomplexity Institute, University of Virginia. 2022;
Mathematical Biocomplexity
Article

Loop homology of bi-secondary structures II

Bura A; He Q; Reidys C . Journal of Algebraic Combinatorics. Spinger. 2022;
Mathematical Biocomplexity
Preprint/Prospective Article

Rapid threat detection in SARS-CoV-2

Barrett C; Huang F; Li T; Warren A; Reidys C . medRxiv. medRxiv . 2022;
Mathematical Biocomplexity
Presentation

Robustness Analysis of Evolutionary Signals

Li T . Virginia Department of Health (VDH) SARS-CoV-2 Genetic Data Meeting. 2022;
Mathematical Biocomplexity
Preprint/Prospective Article

The arithmetic topology of genetic alignments

Barrett C; Bura A; He Q; Huang F; Reidys C . arXiv. 2022;
Mathematical Biocomplexity
Article

tRForest: a novel random forest-based algorithm for tRNA-derived fragment target prediction

Parikh R; Wilson B; Marrah L; Su Z; Saha S; Kumar P; Huang F; Dutta A . NAR Genomics and Bioinformatics. 2022; 4(2):lqac037
Mathematical Biocomplexity
Preprint/Prospective Article

On Weighted Simplicial Homology

Li T; Reidys C . arXiv preprint arXiv:2205.03435. arxiv.org. 2022;
Mathematical Biocomplexity
Software/Dashboard

Weighted Simplicial Homology

Dutta N; Bura A; Li T; Reidys C 2022;